CNV segment data in chromosome view
In IRGV, chromosome segments that exhibit CNV gain or loss are indicated by a blue line. Mouse over the blue line to display context-sensitive information. For some CNV segment analyses, two start, two end, and two ploidy values are displayed, as shown in this example.
The Start, End, and Ploidy values that are listed at the top of the context-sensitive information box represent the start, end, and ploidy information for the entire gene segment that is selected in the software. These values are static and do not change.
The Start, End, and Ploidy information that is listed at the bottom of the context-sensitive information box represent the represent the start, end, and ploidy information for the amplicon that is closest to the cursor.