V-gene usage

Immune Repertoire Analysis Results report the frequency of variable genes and the variable gene allele. Select V‑gene usage from the Views list to see graphs that represent the results. Stacked barplots indicate the representation of variable genes among identified clones.

V-gene usage for alleles

Color segments within each bar indicate the frequency of particular variable gene alleles, arranged by frequency from rarest (top) to most common (bottom), for clones having <2% variable gene mutation. This cutoff is used to avoid noise in allele identification caused by somatic hypermutation.

V-gene usage for clone sizes

Color segments in each bar indicate the contribution of individual clones, arranged from smallest clones (top) to largest clones (bottom).